Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALO56_100692 | Not Available | Positive | 4497216 - 4497575 | 13543.5 |
| pp_03786 | ALO56_02434 | Not Available | Negative | 4497475 - 4498803 | Not Available |
| uncharacterized protein | ALO56_02435 | Not Available | Positive | 4498932 - 4499258 | 12476.2 |
| uncharacterized protein | ALO56_02436 | Not Available | Negative | 4499295 - 4499843 | 19671.6 |
| glutamate-1-semialdehyde aminotransferase | ALO56_100232 | Q48DP1 | Negative | 4500153 - 4501592 | 50906.1 |
| arac family transcriptional regulator | ALO56_02437 | P9WJW2 | Positive | 4501633 - 4503078 | 52955.0 |
| methylated-dna--protein-cysteine methyltransferase | ALO56_02438 | Q9ZET8 | Positive | 4503075 - 4503596 | 19004.2 |
| thiamine-phosphate synthase | ALO56_02439 | Q87VY6 | Negative | 4503715 - 4504344 | 22565.3 |
| bifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase | ALO56_04874 | P76422 | Negative | 4504368 - 4505279 | 32698.5 |
| sensor histidine kinase | ALO56_02441 | Q9KLK7 | Positive | 4505524 - 4507518 | 74497.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









