Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO56_01188 | Not Available | Positive | 4489292 - 4489834 | 20420.4 |
| uncharacterized protein | ALO56_01189 | Not Available | Negative | 4489903 - 4490082 | 6863.86 |
| metallo-beta-lactamase | ALO56_01817 | Q3JRV4 | Positive | 4490772 - 4491656 | 32652.2 |
| uncharacterized protein | ALO56_01818 | Q9R112 | Positive | 4491683 - 4492936 | 45228.4 |
| uncharacterized protein | ALO56_01819 | Not Available | Positive | 4492929 - 4493747 | 27724.3 |
| hypothetical protein | ALO56_01864 | Q48E57 | Negative | 4493854 - 4494174 | 11390.7 |
| cye/dehydrase | ALO56_01865 | O68560 | Negative | 4494167 - 4494601 | 16062.3 |
| transporter | ALO56_01866 | O34383 | Negative | 4494609 - 4496027 | 51088.6 |
| ssra-binding protein | ALO56_01867 | Q87WN1 | Positive | 4496126 - 4496608 | 18435.4 |
| phoh family protein | ALO56_04873 | P0A5S1 | Negative | 4496873 - 4497305 | 16253.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









