Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALO56_200099 | Not Available | Positive | 4473379 - 4474902 | 54548.3 |
| hypothetical protein | ALO56_200175 | Not Available | Positive | 4474988 - 4475890 | 31685.2 |
| hypothetical protein | ALO56_200075 | Q9XD78 | Negative | 4475931 - 4478120 | 78135.2 |
| putative lipoprotein | ALO56_01181 | Not Available | Negative | 4478448 - 4478855 | 15198.3 |
| uncharacterized protein | ALO56_01182 | Not Available | Negative | 4478852 - 4479289 | 16240.5 |
| d-lactate dehydrogenase | ALO56_01183 | Q2UH56 | Negative | 4479335 - 4480348 | 36330.8 |
| pectate lyase | ALO56_01184 | Not Available | Negative | 4480697 - 4483450 | 100539.0 |
| cysteine synthase | ALO56_01185 | Q9I526 | Positive | 4483698 - 4484600 | 32621.1 |
| 23s rrna m methyltransferase | ALO56_100027 | Q885Y8 | Positive | 4484600 - 4485955 | 49412.6 |
| uncharacterized protein | ALO56_05246 | Not Available | Negative | 4485858 - 4489082 | 118484.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









