Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna pyrophosphohydrolase | ALO56_04264 | Q48CC6 | Negative | 4440954 - 4441433 | 18872.7 |
| had family hydrolase | ALO56_04265 | Not Available | Positive | 4441576 - 4442232 | 24915.8 |
| uncharacterized protein | ALO56_04266 | Not Available | Negative | 4442245 - 4442673 | 15656.1 |
| threonine dehydratase | ALO56_04267 | Not Available | Negative | 4442873 - 4443541 | 25011.6 |
| membrane protein | ALO56_05083 | Not Available | Negative | 4443572 - 4445407 | 67401.1 |
| bnr repeat-containing glycosyl hydrolase | ALO56_03588 | Not Available | Negative | 4445519 - 4446565 | 37004.5 |
| glutathionylspermidine synthase | ALO56_03589 | P33222 | Negative | 4446780 - 4447937 | 43854.6 |
| lipoprotein | ALO56_03590 | Not Available | Negative | 4447950 - 4448753 | 27566.6 |
| putative transmembrane protein | ALO56_03591 | P0AF81 | Negative | 4448781 - 4449206 | 14726.4 |
| uncharacterized protein | ALO56_03592 | Not Available | Negative | 4449220 - 4449882 | 24248.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









