Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| binding-protein dependent transport system inner membrane protein | ALO56_04256 | P41032 | Negative | 4428787 - 4429608 | 29651.4 |
| sulfate-binding protein | ALO56_05224 | P0AG78 | Negative | 4429715 - 4430875 | 42237.8 |
| hypothetical protein | ALO56_100001 | Not Available | Negative | 4430856 - 4431161 | 11418.0 |
| sensory box/ggdef domain/eal domain-containing protein | ALO56_05225 | Not Available | Negative | 4431241 - 4433205 | 72183.7 |
| fatty acid desaturase | ALO56_04258 | Not Available | Positive | 4433330 - 4434514 | 45242.9 |
| sensory box/ggdef domain protein | ALO56_04259 | A0A0H3AFM6 | Positive | 4434650 - 4435636 | 37036.7 |
| thymidylate synthase | ALO56_05226 | Q87UL4 | Negative | 4435778 - 4436749 | 36705.9 |
| prolipoprotein diacylglyceryl transferase | ALO56_04261 | Q87UL3 | Negative | 4436802 - 4437614 | 30059.4 |
| uncharacterized protein | ALO56_04262 | Q29RZ5 | Positive | 4437741 - 4438487 | 26661.8 |
| phosphoenolpyruvate-protein phosphotransferase ptsp | ALO56_04263 | P37177 | Negative | 4438653 - 4440932 | 83189.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









