Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp synthase subunit b | ALO56_03229 | Q87TT0 | Positive | 386765 - 387235 | 16983.4 |
| atp synthase subunit delta | ALO56_03230 | Q48BG2 | Positive | 387248 - 387784 | 19342.2 |
| atp synthase subunit alpha | ALO56_03231 | Q48BG3 | Positive | 387806 - 389350 | 55372.5 |
| atp synthase gamma chain | ALO56_03232 | Q3K440 | Positive | 389401 - 390261 | 31426.0 |
| atp synthase subunit beta | ALO56_03233 | Q4ZL24 | Positive | 390289 - 391668 | 49654.4 |
| atp synthase epsilon chain | ALO56_03234 | Q4ZL25 | Positive | 391713 - 392138 | 14761.8 |
| bifunctional protein glmu | ALO56_03235 | Q48BG7 | Positive | 392258 - 393625 | 48410.2 |
| regulatory protein, deor | ALO56_03236 | P15082 | Positive | 393854 - 394621 | 27983.7 |
| glutamine--fructose-6-phosphate aminotransferase | ALO56_03237 | Q87TT8 | Positive | 394631 - 396466 | 66348.0 |
| tnsa endonuclease-like protein | ALO56_100846 | P13988 | Positive | 396696 - 397601 | 34513.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









