Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acrb/acrd/acrf family protein | ALO56_04236 | A6TBH4 | Negative | 4404140 - 4407244 | 113860.0 |
| rnd family efflux transporter mfp subunit | ALO56_04237 | A4WCC0 | Negative | 4407241 - 4408311 | 38611.6 |
| rnd family efflux transporter mfp subunit | ALO56_04238 | Not Available | Negative | 4408308 - 4409426 | 39498.2 |
| uncharacterized protein | ALO56_04239 | Not Available | Negative | 4409551 - 4410594 | 36907.0 |
| uncharacterized protein | ALO56_04240 | Not Available | Negative | 4410713 - 4410925 | 7559.92 |
| abc transporter substrate-binding protein | ALO56_04241 | Not Available | Negative | 4411525 - 4412544 | 36852.0 |
| binding-protein dependent transport system inner membrane protein | ALO56_05220 | Q8YDR8 | Negative | 4412590 - 4413474 | 32490.4 |
| abc transporter atp-binding protein | ALO56_04243 | Q1M7R4 | Negative | 4413536 - 4414417 | 32751.5 |
| taurine dioxygenase | ALO56_04244 | Not Available | Negative | 4414431 - 4415327 | 33528.6 |
| autotransporter | ALO56_04245 | Not Available | Positive | 4415602 - 4418715 | 107633.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









