Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| non--like proteinous end joining protein ku | ALO56_01256 | Q87ZG4 | Negative | 4385411 - 4386316 | 33519.2 |
| alkanesulfonate monooxygenase | ALO56_01257 | Q4ZRE3 | Positive | 4386497 - 4387729 | 44773.3 |
| sigma-54 dependent transcriptional regulator | ALO56_01258 | Q3K999 | Positive | 4387729 - 4388835 | 41354.8 |
| non-ribosomal peptide synthetase syfb | ALO56_01259 | Q70LM5 | Positive | 4388961 - 4390276 | 48090.5 |
| taurine import atp-binding protein taub | ALO56_100149 | Q48C94 | Negative | 4390940 - 4391725 | 28529.5 |
| outer membrane porin | ALO56_00814 | Not Available | Positive | 4393506 - 4394852 | 48696.0 |
| anti-oxidant ahpctsa family protein | ALO56_00815 | Q54SE2 | Positive | 4395022 - 4395660 | 23983.3 |
| hypothetical protein | ALO56_200211 | P76577 | Negative | 4396162 - 4398531 | 87021.1 |
| hypothetical protein | ALO56_200134 | Not Available | Positive | 4398654 - 4398947 | 10701.5 |
| hypothetical protein | ALO56_200003 | P76578 | Negative | 4399001 - 4403950 | 179969.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









