Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-oxoacid coa-transferase | ALO56_01247 | B0RVK3 | Positive | 4370944 - 4371600 | 23207.3 |
| short-chain fatty acid transporter | ALO56_01248 | P76460 | Positive | 4371828 - 4373246 | 50671.6 |
| marr family transcriptional regulator | ALO56_01249 | Not Available | Negative | 4373263 - 4373754 | 17991.7 |
| antibiotic biosynthesis monooxygenase | ALO56_01250 | P54563 | Negative | 4373891 - 4374211 | 12048.0 |
| d-isomer specific 2-hydroxyacid dehydrogenase family protein | ALO56_01251 | Q65CJ7 | Negative | 4375040 - 4375978 | 32572.2 |
| glycerophosphodiester phosphodiesterase | ALO56_01252 | P37965 | Positive | 4376294 - 4377448 | 42114.2 |
| tonb-dependent siderophore receptor | ALO56_100122 | Q05202 | Negative | 4377502 - 4379691 | 78542.6 |
| phosphatidylserine synthase | ALO56_01253 | P23830 | Positive | 4380360 - 4381703 | 50983.3 |
| aldo/keto reductase | ALO56_01254 | A0A5B8YXI2 | Negative | 4381760 - 4382746 | 35579.8 |
| atp-dependent dna ligase | ALO56_04601 | Q9I1X7 | Negative | 4382790 - 4385414 | 97022.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









