Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO56_01720 | A8GHJ1 | Positive | 4362421 - 4363017 | 22842.2 |
| rard protein | ALO56_01721 | O68827 | Positive | 4363148 - 4364032 | 32740.5 |
| atpase | ALO56_01722 | Not Available | Negative | 4364036 - 4365151 | 42131.6 |
| sulfate permease family protein | ALO56_01723 | P55189 | Negative | 4365199 - 4366644 | 51413.8 |
| uncharacterized protein | ALO56_01724 | Not Available | Negative | 4366769 - 4367092 | 11599.0 |
| uncharacterized protein | ALO56_01725 | Not Available | Negative | 4367089 - 4367289 | 7080.54 |
| lysine exporter protein lyse/ygga | ALO56_01243 | Q57L56 | Negative | 4368041 - 4368649 | 21787.2 |
| lipoprotein | ALO56_01244 | Not Available | Negative | 4368783 - 4369097 | 11720.0 |
| lysr family transcriptional regulator | ALO56_01245 | Not Available | Negative | 4369163 - 4370056 | 32864.0 |
| 3-oxoacid coa-transferase, subunit a family protein | ALO56_01246 | B0RVK4 | Positive | 4370183 - 4370884 | 25281.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









