Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALO56_200036 | Not Available | Positive | 4350077 - 4350637 | 20835.5 |
| hypothetical protein | ALO56_200170 | Q887B7 | Positive | 4350639 - 4351703 | 38420.3 |
| hypothetical protein | ALO56_200179 | Q46646 | Positive | 4351700 - 4352353 | 24076.5 |
| hypothetical protein | ALO56_200080 | P69982 | Positive | 4352368 - 4352628 | 9288.01 |
| hypothetical protein | ALO56_200210 | Not Available | Positive | 4352630 - 4353427 | 29098.1 |
| hypothetical protein | ALO56_200208 | P69986 | Positive | 4353453 - 4354538 | 40678.1 |
| hypothetical protein | ALO56_200067 | Not Available | Positive | 4354653 - 4359812 | 185319.0 |
| hypothetical protein | ALO56_200205 | Not Available | Positive | 4359908 - 4360525 | 22535.8 |
| hypothetical protein | ALO56_01921 | Not Available | Positive | 4360618 - 4360857 | 9287.93 |
| transporter | ALO56_01719 | Q7CH99 | Negative | 4360877 - 4362028 | 38993.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









