Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase s49, sppa | ALO56_04925 | Q8YFI5 | Negative | 4305917 - 4306921 | 36455.5 |
| pseudouridine synthase | ALO56_02787 | Q9HZM9 | Negative | 4307586 - 4308557 | 36077.4 |
| ribonuclease e | ALO56_02788 | P44443 | Positive | 4309263 - 4312523 | 120053.0 |
| udp-n-acetylenolpyruvoylglucosamine reductase | ALO56_02789 | Q87YF8 | Negative | 4312635 - 4313654 | 37263.7 |
| 3-deoxy-manno-octulosonate cytidylyltransferase | ALO56_02790 | Q4ZVY8 | Negative | 4313689 - 4314453 | 27517.9 |
| hypothetical protein | ALO56_02791 | Not Available | Negative | 4314450 - 4314635 | 6600.16 |
| tetraacyldisaccharide 4'-kinase | ALO56_02792 | Q4ZVY9 | Negative | 4314653 - 4315648 | 36624.1 |
| biopolymer transport protein exbd/tolr | ALO56_02793 | Not Available | Negative | 4315648 - 4316079 | 15686.9 |
| mota/tolq/exbb proton channel | ALO56_02794 | P72941 | Negative | 4316076 - 4316753 | 24245.0 |
| dna internalization-related competence protein comec/rec2 | ALO56_02795 | P51973 | Negative | 4316825 - 4319041 | 80249.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









