Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO56_02777 | P44720 | Negative | 4297844 - 4298983 | 41732.7 |
| 4-amino-4-deoxychorismate lyase | ALO56_02778 | Q56693 | Negative | 4298987 - 4299802 | 29721.0 |
| 3-oxoacyl- synthase 2 | ALO56_02779 | Not Available | Negative | 4299802 - 4301046 | 43208.4 |
| acyl carrier protein | ALO56_02780 | P80923 | Negative | 4301160 - 4301396 | 8656.01 |
| 3-ketoacyl- reductase | ALO56_02781 | O54438 | Negative | 4301589 - 4302332 | 25700.0 |
| malonyl coa-acyl carrier protein transacylase | ALO56_02782 | O85140 | Negative | 4302348 - 4303286 | 32627.1 |
| phosphate acyltransferase | ALO56_04923 | Q48L43 | Negative | 4303417 - 4304454 | 36295.4 |
| 50s ribosomal protein l32 | ALO56_101284 | Q48L44 | Negative | 4304444 - 4304626 | 6770.98 |
| uncharacterized protein | ALO56_02784 | P0A1T3 | Negative | 4304640 - 4305167 | 19301.1 |
| maf-like protein | ALO56_02785 | Q4ZVY2 | Positive | 4305199 - 4305852 | 23886.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









