Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative membrane protein insertion efficiency factor | ALO56_03219 | Q87TS0 | Positive | 376593 - 376838 | 9176.15 |
| membrane protein insertase yidc | ALO56_03220 | Q4ZL11 | Positive | 376841 - 378526 | 61882.1 |
| trna modification gtpase mnme | ALO56_03221 | Q87TS2 | Positive | 378564 - 379976 | 50451.1 |
| trna uridine 5-carboxymethylaminomethyl modification enzyme mnmg | ALO56_03222 | Q9F5X1 | Positive | 380630 - 382525 | 69355.0 |
| ribosomal rna small subunit methyltransferase g | ALO56_03223 | Q4ZL14 | Positive | 382522 - 383178 | 24174.2 |
| chromosome partitioning protein para | ALO56_03224 | P0A149 | Positive | 383197 - 383988 | 28878.2 |
| parb family protein | ALO56_03225 | P0A151 | Positive | 383998 - 384870 | 32278.2 |
| f0f1 atp synthase subunit i | ALO56_03226 | P0A103 | Positive | 384984 - 385424 | 15934.0 |
| atp synthase subunit a | ALO56_03227 | Q87TS8 | Positive | 385441 - 386310 | 31774.5 |
| atp synthase f0f1 subunit c | ALO56_03228 | Q48BG0 | Positive | 386450 - 386707 | 8609.06 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









