Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-asp | Not Available | Not Available | Positive | 4279120 - 4279196 | Not Available |
| Trna-val | Not Available | Not Available | Positive | 4279263 - 4279338 | Not Available |
| oxidoreductase | ALO56_100068 | Q51576 | Negative | 4279480 - 4280298 | 28843.3 |
| o-succinylhomoserine sulfhydrylase | ALO56_02761 | P55218 | Negative | 4280295 - 4281506 | 43283.6 |
| amidophosphoribosyltransferase | ALO56_04921 | Q51342 | Negative | 4281527 - 4283044 | 56032.0 |
| colicin v production protein cvpa | ALO56_02763 | P45108 | Negative | 4283048 - 4283635 | 20923.1 |
| sporulation related protein | ALO56_02764 | Not Available | Negative | 4283765 - 4284451 | 23724.4 |
| folylpolyglutamate synthetase | ALO56_02765 | P08192 | Negative | 4284435 - 4285739 | 46899.2 |
| acetyl-coenzyme a carboxylase carboxyl transferase subunit beta | ALO56_02766 | Q48L24 | Negative | 4285736 - 4286656 | 33454.2 |
| n-anthranilate isomerase | ALO56_02767 | Q87YI1 | Negative | 4286907 - 4287527 | 21781.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









