Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cold-shock protein, dna-binding | ALO56_00490 | P72192 | Negative | 4266200 - 4266412 | 7681.04 |
| aminomethyltransferase | ALO56_00491 | Q54DD3 | Negative | 4266806 - 4267930 | 40494.4 |
| glycine dehydrogenase | ALO56_00492 | Q48ME3 | Negative | 4268005 - 4270869 | 103807.0 |
| glycine cleavage system h protein | ALO56_00493 | Q887L4 | Negative | 4270880 - 4271263 | 13847.0 |
| sensory box protein/response regulator | ALO56_04432 | Not Available | Negative | 4271562 - 4273688 | 79553.4 |
| response regulator receiver | ALO56_00495 | A6X580 | Negative | 4273689 - 4274078 | 14004.2 |
| uncharacterized protein | ALO56_00496 | Not Available | Negative | 4274063 - 4275781 | 63457.6 |
| transcriptional regulator tyrr | ALO56_04434 | Q9ZIB7 | Negative | 4275948 - 4277522 | 56837.7 |
| lipoprotein | ALO56_02760 | Not Available | Negative | 4277877 - 4278707 | 28967.3 |
| Trna-asp | Not Available | Not Available | Positive | 4278929 - 4279005 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









