Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO56_05071 | Not Available | Positive | 4254422 - 4255048 | 23401.9 |
| ribosomal rna large subunit methyltransferase f | ALO56_00482 | Q887M4 | Negative | 4255174 - 4256187 | 37342.8 |
| valine--trna ligase | ALO56_04430 | Q4ZXI0 | Negative | 4256352 - 4259450 | 116765.0 |
| uncharacterized protein | ALO56_00484 | Not Available | Positive | 4259380 - 4260516 | 42485.8 |
| uncharacterized protein | ALO56_00485 | Not Available | Negative | 4260644 - 4261093 | 16437.3 |
| dna polymerase iii subunit chi | ALO56_00486 | O68823 | Negative | 4261101 - 4261529 | 16341.4 |
| putative cytosol aminopeptidase | ALO56_00487 | Q4ZXH7 | Negative | 4261587 - 4263077 | 52336.6 |
| uncharacterized protein | ALO56_00488 | P0AFA0 | Positive | 4263396 - 4264517 | 41511.6 |
| putative permease | ALO56_100114 | P0ADC7 | Positive | 4264510 - 4265571 | 38802.6 |
| uncharacterized protein | ALO56_00489 | Not Available | Negative | 4265629 - 4266132 | 18967.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









