Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALO56_03533 | Not Available | Negative | 4240230 - 4240856 | 22897.6 |
| gntr family transcriptional regulator | ALO56_03534 | P77730 | Positive | 4240994 - 4242430 | 52891.8 |
| multidrug efflux pump | ALO56_03535 | Not Available | Negative | 4242564 - 4245650 | 110779.0 |
| secretion protein hlyd | ALO56_03536 | Not Available | Negative | 4245647 - 4246780 | 39707.7 |
| mlta-interacting mipa | ALO56_03537 | Not Available | Negative | 4246797 - 4247630 | 29600.8 |
| rnd efflux system, outer membrane lipoprotein, nodt | ALO56_03538 | Q8CWA4 | Negative | 4247627 - 4249132 | 54582.2 |
| response regulator receiver:transcriptional regulatory protein, c-terminal | ALO56_03539 | P69229 | Positive | 4249231 - 4249920 | 25598.1 |
| sensor histidine kinase | ALO56_03540 | P30847 | Positive | 4249926 - 4251104 | 43456.7 |
| glutamate carboxypeptidase | ALO56_05070 | Not Available | Negative | 4251114 - 4252394 | 45264.8 |
| amp-binding domain protein | ALO56_03542 | O31826 | Positive | 4252604 - 4254277 | 61714.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









