Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| proteinral secretory pathway protein i/v | ALO56_03523 | Not Available | Positive | 4214659 - 4215045 | 13892.3 |
| proteinral secretion protein c | ALO56_03524 | Not Available | Negative | 4215051 - 4215482 | 14707.8 |
| proteinral secretion protein h | ALO56_03525 | Not Available | Positive | 4215566 - 4216027 | 17031.5 |
| putative proteinral secretion pathway protein j/w | ALO56_03526 | Not Available | Positive | 4216024 - 4216635 | 22974.4 |
| is66 orf2 family protein | ALO56_03527 | Not Available | Positive | 4216749 - 4216958 | 8185.97 |
| ispsy5, transposase | ALO56_03528 | Not Available | Positive | 4217593 - 4218717 | 42137.7 |
| putative hemagglutinin-related protein | ALO56_03529 | Not Available | Negative | 4218748 - 4218975 | 7443.64 |
| filamentous hemagglutinin, intein-containing | ALO56_05066 | D5CBA0 | Negative | 4221500 - 4237522 | 546512.0 |
| hemolysin activator protein, hlyb family | ALO56_05067 | Q0T962 | Negative | 4237486 - 4239228 | 64363.6 |
| uncharacterized protein | ALO56_03532 | Not Available | Negative | 4239333 - 4240226 | 31826.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









