Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipoprotein | ALO56_03494 | Not Available | Positive | 4183725 - 4184204 | 16921.7 |
| uncharacterized protein | ALO56_03495 | Not Available | Negative | 4184248 - 4184511 | 9969.01 |
| uncharacterized protein | ALO56_03496 | Not Available | Positive | 4184629 - 4184973 | 12179.5 |
| uncharacterized protein | ALO56_03497 | Not Available | Negative | 4185048 - 4185398 | 12724.3 |
| bacillolysin | ALO56_03498 | Q99132 | Positive | 4185667 - 4186734 | 38548.3 |
| uncharacterized protein | ALO56_03499 | Not Available | Positive | 4186754 - 4187053 | 10972.8 |
| paraquat-inducible protein a | ALO56_03500 | P0AD04 | Positive | 4187298 - 4187927 | 22852.1 |
| paraquat-inducible protein a | ALO56_03501 | P0AFM0 | Positive | 4187924 - 4188538 | 23206.8 |
| pqib family protein | ALO56_03502 | P43671 | Positive | 4188531 - 4190207 | 60692.3 |
| uncharacterized protein | ALO56_03503 | Not Available | Positive | 4190204 - 4190827 | 22392.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









