Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| asnc family transcriptional regulator | ALO56_03485 | P0ACJ7 | Positive | 4172117 - 4172584 | 17655.6 |
| uncharacterized protein | ALO56_03486 | Not Available | Positive | 4173010 - 4173612 | 22901.6 |
| peptidase m14, carboxypeptidase a | ALO56_03487 | P30795 | Positive | 4173662 - 4174837 | 44104.6 |
| major facilitator transporter | ALO56_05051 | Not Available | Negative | 4175191 - 4176429 | 42979.8 |
| transcriptional regulator | ALO56_03489 | Not Available | Positive | 4176521 - 4177066 | 20011.0 |
| protein kinase | ALO56_03490 | Not Available | Positive | 4177144 - 4178448 | 47842.5 |
| putative transcriptional regulatory protein | ALO56_05052 | Q880J5 | Negative | 4178470 - 4179225 | 27367.4 |
| rhs element vgr protein | ALO56_03492 | Not Available | Positive | 4179486 - 4181447 | 73894.4 |
| enoyl-coa hydratase | ALO56_100923 | Q52995 | Negative | 4181434 - 4182258 | 29784.5 |
| acetyl-coa acetyltransferase | ALO56_05053 | Q86AD9 | Negative | 4182299 - 4183834 | 53615.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









