Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pathoproteinsis-like protein | ALO56_03209 | Not Available | Negative | 353376 - 355358 | 73445.9 |
| uncharacterized protein | ALO56_03210 | P0DW47 | Negative | 355355 - 357724 | 87512.0 |
| uncharacterized protein | ALO56_03211 | Not Available | Negative | 360763 - 363501 | 100645.0 |
| radical sam domain-containing protein | ALO56_03212 | Not Available | Positive | 364213 - 365592 | 50610.6 |
| uncharacterized protein | ALO56_03213 | Not Available | Positive | 365736 - 369020 | 122630.0 |
| dna gyrase subunit b | ALO56_05004 | P13364 | Negative | 369243 - 371675 | 90654.0 |
| dna replication and repair protein recf | ALO56_03215 | Q88BK1 | Negative | 371665 - 372768 | 41597.8 |
| dna polymerase iii subunit beta | ALO56_03216 | P0A120 | Negative | 372789 - 373892 | 40602.1 |
| chromosomal replication initiator protein dnaa | ALO56_03217 | Q500U7 | Negative | 373931 - 375463 | 56963.1 |
| 50s ribosomal protein l34 | ALO56_03218 | Q48BE9 | Positive | 376048 - 376182 | 5124.46 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









