Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arabinose import atp-binding protein arag | ALO56_03466 | Q48IS7 | Negative | 4142883 - 4144415 | 55589.8 |
| arabinose abc transporter l-arabinose-binding periplasmic protein araf | ALO56_03467 | P02924 | Negative | 4144460 - 4145473 | 36176.4 |
| senescence marker protein-30 family protein | ALO56_03468 | Q9A9Z1 | Negative | 4145658 - 4146530 | 31536.1 |
| gntr family transcriptional regulator | ALO56_03469 | P31475 | Negative | 4146611 - 4147330 | 26257.8 |
| aldose 1-epimerase | ALO56_03470 | P05149 | Positive | 4147595 - 4148701 | 40073.0 |
| cation abc transporter substrate-binding protein | ALO56_05044 | Q92AG1 | Negative | 4149194 - 4150312 | 40336.1 |
| cation abc transporter permease | ALO56_03472 | P31309 | Negative | 4150102 - 4150971 | 30158.5 |
| cation abc transporter atp-binding protein | ALO56_03473 | O34338 | Negative | 4150968 - 4151717 | 27253.8 |
| biotin synthase related domain containing protein | ALO56_100160 | Not Available | Positive | 4151982 - 4153250 | 47123.6 |
| phzf family phenazine biosynthesis protein | ALO56_05045 | Q8NIL3 | Negative | 4154478 - 4155320 | 29963.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









