Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonucleoside-diphosphate reductase subunit beta | ALO56_05143 | Q9Z6S4 | Negative | 4128506 - 4129759 | 47433.6 |
| filamentation induced by camp protein fic | ALO56_03939 | P20605 | Negative | 4130387 - 4130992 | 22868.2 |
| uncharacterized protein | ALO56_03940 | Not Available | Negative | 4130992 - 4131162 | 6436.7 |
| ribonucleoside-diphosphate reductase | ALO56_05144 | Q9PL93 | Negative | 4131418 - 4134426 | 111377.0 |
| dna-binding response regulator rsta | ALO56_03942 | Not Available | Positive | 4135019 - 4135756 | 27523.1 |
| sensor histidine kinase | ALO56_03943 | Not Available | Positive | 4135763 - 4137373 | 59766.5 |
| hypothetical protein | ALO56_200202 | Not Available | Negative | 4137654 - 4137839 | 6701.37 |
| aromatic amino acid aminotransferase | ALO56_00194 | P72173 | Negative | 4138007 - 4139203 | 43319.0 |
| uvrabc system protein b | ALO56_04370 | Q4ZV05 | Positive | 4139589 - 4141604 | 76251.1 |
| l-arabinose abc transporter, permease protein | ALO56_03465 | P0AE26 | Negative | 4141876 - 4142865 | 35006.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









