Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cye | ALO56_03929 | P0AAP2 | Negative | 4108914 - 4110032 | 41368.4 |
| major facilitator transporter | ALO56_05142 | Not Available | Negative | 4110244 - 4111506 | 43462.4 |
| lysr family transcriptional regulator | ALO56_03931 | Not Available | Positive | 4111568 - 4112476 | 32630.4 |
| uncharacterized protein | ALO56_03932 | Not Available | Negative | 4112489 - 4113079 | 20006.3 |
| aerotaxis receptor | ALO56_03933 | Q9I3F6 | Positive | 4114088 - 4115653 | 56539.7 |
| uncharacterized protein | ALO56_03934 | Not Available | Positive | 4118157 - 4118924 | 28606.4 |
| uncharacterized protein | ALO56_03935 | Not Available | Positive | 4120268 - 4121419 | 43546.7 |
| uncharacterized protein | ALO56_03936 | Not Available | Positive | 4121895 - 4124003 | 75684.4 |
| 3-hydroxyacyl-coa dehydrogenase | ALO56_03937 | Q988C8 | Negative | 4124306 - 4125247 | 34440.8 |
| putative transcriptional regulator | ALO56_100659 | Not Available | Negative | 4125552 - 4125935 | 14636.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









