Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO56_02891 | Not Available | Negative | 4087452 - 4088336 | 33954.6 |
| glycosyl transferase family protein | ALO56_04947 | Not Available | Positive | 4088525 - 4089577 | 39596.4 |
| hypothetical protein | ALO56_200145 | Not Available | Negative | 4089758 - 4090666 | 31683.2 |
| hypothetical protein | ALO56_200217 | Q9KD29 | Negative | 4090667 - 4091566 | 30848.1 |
| hypothetical protein | ALO56_200132 | Q28VN1 | Negative | 4091566 - 4092330 | 27561.5 |
| hypothetical protein | ALO56_200118 | Not Available | Negative | 4092327 - 4093259 | 33847.8 |
| hypothetical protein | ALO56_200214 | Not Available | Negative | 4093285 - 4093854 | 20296.9 |
| hypothetical protein | ALO56_200081 | Not Available | Negative | 4093851 - 4094189 | 11852.1 |
| hypothetical protein | ALO56_200184 | Not Available | Negative | 4094186 - 4094728 | 19961.1 |
| hypothetical protein | ALO56_200139 | Not Available | Negative | 4094725 - 4095936 | 45329.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









