Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyrroloquinoline-quinone synthase | ALO56_02882 | Q48CT5 | Negative | 4075191 - 4075946 | 29104.4 |
| coenzyme pqq synthesis protein b | ALO56_02883 | Q88A81 | Negative | 4075955 - 4076866 | 33395.8 |
| coenzyme pqq synthesis protein f | ALO56_02884 | Q88A79 | Negative | 4077158 - 4079524 | 86817.2 |
| hydrolase | ALO56_02885 | P55176 | Negative | 4080129 - 4080920 | 29189.7 |
| tryptophan synthase subunit alpha | ALO56_02886 | P06617 | Negative | 4080936 - 4082615 | 62430.5 |
| asnc family transcriptional regulator | ALO56_02887 | Q8U0P3 | Negative | 4082768 - 4083229 | 16613.1 |
| hypothetical protein | ALO56_100954 | Not Available | Positive | 4084302 - 4084523 | 8125.94 |
| nerd domain-containing protein | ALO56_02888 | Q8KYT4 | Negative | 4084507 - 4085142 | 24534.8 |
| fic family protein | ALO56_04946 | Not Available | Negative | 4085220 - 4086392 | 44234.5 |
| uncharacterized protein | ALO56_02890 | Not Available | Negative | 4086455 - 4087339 | 33200.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









