Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharide biosynthesis protein | ALO56_01397 | Not Available | Negative | 4061026 - 4061805 | 29626.3 |
| lipopolysaccharide core biosynthesis protein | ALO56_01398 | Not Available | Negative | 4061802 - 4062536 | 28631.3 |
| lipopolysaccharide core heptose kinase rfap | ALO56_01399 | Q9HUF7 | Negative | 4062536 - 4063342 | 30710.1 |
| lipopolysaccharide core biosynthesis protein rfag | ALO56_01400 | P25740 | Negative | 4063342 - 4064463 | 42146.8 |
| lipopolysaccharide heptosyltransferase i | ALO56_01401 | P24173 | Negative | 4064463 - 4065527 | 39363.2 |
| lipopolysaccharide heptosyltransferase ii | ALO56_01402 | P45042 | Negative | 4065530 - 4066564 | 38081.0 |
| hypothetical protein | ALO56_100681 | Not Available | Positive | 4066481 - 4066651 | 6478.71 |
| glutamate-ammonia-ligase adenylyltransferase | ALO56_01403 | Q87VD5 | Negative | 4066693 - 4069650 | 110962.0 |
| uncharacterized protein | ALO56_05249 | Not Available | Negative | 4069919 - 4073254 | 120090.0 |
| dihydrolipoamide acetyltransferase | ALO56_01405 | Q59638 | Positive | 4072821 - 4074455 | 56199.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









