Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| toluene tolerance protein | ALO56_01387 | Not Available | Positive | 4044345 - 4044983 | 23899.1 |
| uncharacterized protein | ALO56_01388 | Not Available | Negative | 4045024 - 4046187 | 43600.6 |
| uncharacterized protein | ALO56_01389 | Not Available | Negative | 4046177 - 4046947 | 29726.5 |
| uncharacterized protein | ALO56_01390 | Not Available | Negative | 4046982 - 4047938 | 36922.4 |
| uncharacterized protein | ALO56_01391 | Not Available | Negative | 4047969 - 4049405 | 53664.8 |
| uncharacterized protein | ALO56_01392 | Not Available | Negative | 4049375 - 4050271 | 33669.1 |
| group 1 glycosyl transferase | ALO56_01393 | Q59002 | Negative | 4050271 - 4051401 | 41868.7 |
| carbamoyltransferase | ALO56_01394 | P74178 | Negative | 4051385 - 4053142 | 65494.9 |
| type iii effector hopac1 | ALO56_01395 | Not Available | Positive | 4053389 - 4059553 | 228701.0 |
| uncharacterized protein | ALO56_01396 | Not Available | Negative | 4059581 - 4061026 | 54106.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









