Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-glucose 6-dehydrogenase | ALO56_100445 | O86422 | Positive | 4030144 - 4031538 | 51639.9 |
| phosphomethylpyrimidine synthase | ALO56_01380 | Q4ZZ08 | Negative | 4032074 - 4034098 | 74618.7 |
| outer membrane efflux protein tolc | ALO56_01381 | Not Available | Positive | 4034265 - 4035824 | 57948.8 |
| 3-deoxy-d-manno-octulosonic-acid transferase | ALO56_01382 | P0AC77 | Negative | 4035994 - 4037319 | 48400.2 |
| small multidrug resistance protein | ALO56_01383 | Q9HUH5 | Positive | 4037412 - 4037744 | 11678.1 |
| oxidoreductase, fad-binding protein | ALO56_04639 | Q9HUH4 | Positive | 4037787 - 4038968 | 42006.9 |
| oxidoreductase, aldo/keto reductase family protein | ALO56_100079 | P46905 | Positive | 4038965 - 4039780 | 29073.9 |
| uncharacterized protein | ALO56_01385 | Not Available | Positive | 4039817 - 4040779 | 36627.6 |
| hypothetical protein | ALO56_04641 | Q4ZZ15 | Negative | 4040818 - 4042239 | 50117.4 |
| lipid a export atp-binding/permease protein msba | ALO56_04642 | Q4ZZ16 | Negative | 4042426 - 4044450 | 74666.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









