Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| potassium transporter peripheral membrane component | ALO56_03201 | E1V6C6 | Positive | 337933 - 339306 | 49810.2 |
| molybdopterin oxidoreductase subunit alpha | ALO56_100109 | Not Available | Positive | 339498 - 341852 | 86752.4 |
| lipid a biosynthesis lauroyl acyltransferase | ALO56_03202 | Not Available | Negative | 342010 - 342897 | 32753.3 |
| dna-3-methyladenine glycosidase i | ALO56_05001 | P05100 | Negative | 342935 - 343609 | 25690.2 |
| glycyl-trna synthetase subunit alpha | ALO56_05002 | Q88B36 | Positive | 343464 - 344513 | 39932.4 |
| glycine--trna ligase beta subunit | ALO56_100116 | Q88B35 | Positive | 344510 - 346564 | 75009.0 |
| d,d-heptose 1,7-bisphosphate phosphatase | ALO56_03205 | Q88RS0 | Positive | 346575 - 347132 | 19616.5 |
| phospholipid/glycerol acyltransferase | ALO56_03206 | O35083 | Positive | 347187 - 347957 | 28620.0 |
| uncharacterized protein | ALO56_03207 | Not Available | Positive | 348346 - 348882 | 20401.3 |
| uncharacterized protein | ALO56_05262 | Not Available | Negative | 349487 - 353224 | 139682.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









