Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-galactose 1-dehydrogenase | ALO56_04689 | P11886 | Negative | 4018234 - 4019199 | 35425.4 |
| transcriptional regulators of sugar metabolism | ALO56_01691 | O31713 | Negative | 4019284 - 4020078 | 28024.6 |
| uncharacterized protein | ALO56_04691 | Not Available | Negative | 4020300 - 4022219 | 69422.0 |
| udp-4-amino-4-deoxy-l-arabinose--oxoglutarate aminotransferase | ALO56_01693 | Q4ZSZ4 | Positive | 4022697 - 4023869 | 42789.6 |
| undecaprenyl-phosphate 4-deoxy-4-formamido-l-arabinose transferase | ALO56_01694 | Q48HZ2 | Positive | 4023866 - 4024879 | 37898.1 |
| bifunctional polymyxin resistance protein arna | ALO56_01695 | Q48HZ1 | Positive | 4024876 - 4026867 | 74064.9 |
| putative 4-deoxy-4-formamido-l-arabinose-phosphoundecaprenol deformylase arnd | ALO56_01696 | Q4ZSZ1 | Positive | 4026867 - 4027748 | 32665.2 |
| undecaprenyl phosphate-alpha-4-amino-4-deoxy-l-arabinose arabinosyl transferase | ALO56_01697 | Q4ZSZ0 | Positive | 4027745 - 4029397 | 61407.7 |
| putative 4-amino-4-deoxy-l-arabinose-phosphoundecaprenol flippase subunit arne | ALO56_01698 | Q48HY8 | Positive | 4029394 - 4029738 | 12540.0 |
| putative 4-amino-4-deoxy-l-arabinose-phosphoundecaprenol flippase subunit arnf | ALO56_01699 | Q48HY7 | Positive | 4029735 - 4030166 | 15468.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









