Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO56_01672 | Not Available | Positive | 3999705 - 4000856 | 42526.8 |
| uncharacterized protein | ALO56_01673 | Not Available | Positive | 4000853 - 4002016 | 42278.9 |
| uncharacterized protein | ALO56_01674 | P0DW34 | Negative | 4002019 - 4003239 | 45674.8 |
| xre family transcriptional regulator | ALO56_01675 | Not Available | Positive | 4003947 - 4004207 | 9323.18 |
| hipa domain-containing protein | ALO56_01676 | Not Available | Positive | 4004210 - 4005544 | 49481.5 |
| hypothetical protein | ALO56_01677 | Not Available | Negative | 4005625 - 4005861 | 8775.72 |
| hypothetical protein | ALO56_101226 | Not Available | Negative | 4006143 - 4006379 | 8718.51 |
| nicotinamidase family protein ycac | ALO56_100331 | Not Available | Positive | 4006897 - 4007565 | 24666.5 |
| uncharacterized protein | ALO56_01678 | Not Available | Negative | 4007659 - 4008093 | 16343.5 |
| methylmalonyl-coa epimerase | ALO56_01679 | Not Available | Positive | 4008214 - 4008672 | 17135.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









