Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative ribose transporter permease | ALO56_04087 | P44736 | Positive | 3951058 - 3952089 | 35665.9 |
| ribose abc transporter periplasmic ribose-binding protein | ALO56_04088 | A0QYB3 | Positive | 3952154 - 3953086 | 32201.7 |
| putative ribose abc transporter atp-binding protein | ALO56_04089 | Q9RDI1 | Positive | 3953141 - 3954652 | 53904.5 |
| short chain dehydrogenase | ALO56_04090 | P87219 | Positive | 3954663 - 3955427 | 26722.2 |
| 2,3-butanediol dehydrogenase/acetoin reductase | ALO56_04091 | A0A2H3D8Y2 | Positive | 3955485 - 3956288 | 28837.5 |
| transcriptional regulator | ALO56_04092 | P37078 | Positive | 3956369 - 3957310 | 34443.4 |
| putative exported pectin lyase | ALO56_04093 | Q0CFF7 | Positive | 3957482 - 3958858 | 48933.8 |
| response regulator | ALO56_04094 | Not Available | Positive | 3958985 - 3959422 | 15640.7 |
| dimethylmenaquinone methyltransferase | ALO56_04095 | Q9KBI9 | Negative | 3959497 - 3960153 | 23343.2 |
| uncharacterized protein | ALO56_04096 | Not Available | Negative | 3960144 - 3960920 | 28993.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









