Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO56_04067 | Not Available | Negative | 3925457 - 3925792 | 12481.6 |
| nadh:flavin oxidoreductase/nadh oxidase | ALO56_04068 | Not Available | Negative | 3925872 - 3926975 | 39829.3 |
| major facilitator superfamily protein | ALO56_04069 | A6UZY0 | Positive | 3927298 - 3928497 | 41343.0 |
| ntaa/snaa/soxa family monooxygenase | ALO56_04070 | O34974 | Positive | 3928779 - 3930125 | 49754.2 |
| d-isomer specific 2-hydroxyacid dehydrogenase family protein | ALO56_04071 | P0C1E9 | Positive | 3930122 - 3931081 | 34412.0 |
| endoribonuclease l-psp | ALO56_04072 | Not Available | Negative | 3931142 - 3931576 | 15130.0 |
| amine oxidase, flavin-containing protein | ALO56_04073 | A6MFL0 | Negative | 3931622 - 3933202 | 57242.7 |
| extracellular solute-binding protein | ALO56_04074 | Not Available | Negative | 3933225 - 3934169 | 33213.5 |
| amino acid abc transporter atp-binding protein | ALO56_04075 | Not Available | Negative | 3934202 - 3934996 | 29162.5 |
| tonb-dependent receptor:tonb-dependent receptor | ALO56_04076 | Q8DD41 | Negative | 3936038 - 3938485 | 87340.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









