Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO56_04057 | Not Available | Negative | 3912991 - 3913857 | 32593.3 |
| ncs1 nucleoside transporter | ALO56_04058 | Not Available | Negative | 3913895 - 3915436 | 54652.2 |
| guanidinobutyrase | ALO56_04059 | Q9I3S3 | Negative | 3915561 - 3916520 | 34644.7 |
| lysr family transcriptional regulator | ALO56_04060 | Q9I6Z9 | Positive | 3916735 - 3917625 | 33319.3 |
| major facilitator transporter | ALO56_04061 | Not Available | Negative | 3917632 - 3918927 | 46795.4 |
| hypothetical protein | ALO56_04062 | Not Available | Positive | 3919249 - 3919473 | 8903.73 |
| arac family transcriptional regulator | ALO56_04063 | Not Available | Negative | 3919537 - 3920448 | 33226.4 |
| uncharacterized protein | ALO56_04064 | Not Available | Negative | 3920474 - 3921475 | 35822.6 |
| putative xanthine dehydrogenase yagr, molybdenum binding subunit | ALO56_04065 | Not Available | Negative | 3921485 - 3923875 | 85213.0 |
| aldehyde oxidase small subunit | ALO56_04066 | Q8X6I9 | Negative | 3924861 - 3925349 | 17275.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









