Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb domain-containing protein | ALO56_04048 | Q9RMT3 | Negative | 3900680 - 3901393 | 24430.8 |
| uncharacterized protein | ALO56_04049 | Not Available | Negative | 3902047 - 3903204 | 41466.4 |
| integral membrane protein | ALO56_04050 | Not Available | Positive | 3903757 - 3904398 | 23610.9 |
| lysr family transcriptional regulator | ALO56_04051 | Not Available | Negative | 3904412 - 3905368 | 35117.2 |
| aldolase ii superfamily protein | ALO56_04052 | Q9HYH5 | Positive | 3905482 - 3906237 | 27668.9 |
| putative betaine-aldehyde dehydrogenase | ALO56_04053 | P17202 | Negative | 3906271 - 3907728 | 52410.3 |
| uncharacterized protein | ALO56_04054 | Q9HUI8 | Negative | 3907747 - 3909348 | 57858.9 |
| amino acid abc transporter atp-binding protein | ALO56_100798 | P27675 | Negative | 3909345 - 3910862 | 55707.2 |
| amino acid abc transporter substrate-binding protein | ALO56_04055 | P0AEQ5 | Negative | 3911130 - 3911924 | 28518.3 |
| 2og-fe oxygenase | ALO56_04056 | P27744 | Negative | 3911957 - 3912994 | 38371.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









