Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | ALO56_04040 | P55619 | Negative | 3890362 - 3891282 | 33510.6 |
| dehydrogenase | ALO56_04041 | A0A481WNM5 | Positive | 3891367 - 3892164 | 29883.4 |
| hypothetical protein | ALO56_101243 | Not Available | Positive | 3892139 - 3893539 | 50796.6 |
| oxidoreductase, fad-binding | ALO56_100405 | P33642 | Negative | 3893611 - 3894942 | 47296.4 |
| uncharacterized protein | ALO56_04042 | Not Available | Positive | 3895247 - 3895984 | 26528.2 |
| proteinral secretion pathway protein gspk | ALO56_04043 | P34026 | Negative | 3896064 - 3896795 | 26516.3 |
| xpsi | ALO56_04044 | Not Available | Negative | 3896792 - 3897181 | 14053.0 |
| tonb-dependent receptor | ALO56_05167 | Not Available | Negative | 3897207 - 3899507 | 83310.4 |
| tonb system transport protein exbd | ALO56_04046 | Not Available | Negative | 3899578 - 3900018 | 15452.4 |
| tonb system transport protein exbb | ALO56_04047 | B0RLE6 | Negative | 3899984 - 3900670 | 24591.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









