Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-glucose 4-epimerase | ALO56_04020 | Q9CNY5 | Negative | 3864854 - 3865882 | 37370.8 |
| uncharacterized protein | ALO56_04021 | Not Available | Positive | 3866294 - 3867451 | 43075.1 |
| udp-galactopyranose mutase | ALO56_04022 | Q48485 | Positive | 3867439 - 3868635 | 45711.1 |
| uncharacterized protein | ALO56_04023 | Not Available | Positive | 3868638 - 3869783 | 43334.2 |
| abc transporter-like protein | ALO56_04024 | Q8T9W2 | Positive | 3869787 - 3871541 | 64154.4 |
| histidine kinase | ALO56_04025 | Q4ZSY3 | Positive | 3871675 - 3873282 | 59035.5 |
| transcription regulator protein | ALO56_04026 | Not Available | Negative | 3873380 - 3873985 | 21822.3 |
| rnd family efflux transporter mfp subunit | ALO56_04027 | P52477 | Positive | 3874105 - 3875289 | 41920.1 |
| multidrug efflux transporter | ALO56_04028 | P31224 | Positive | 3875306 - 3878401 | 111684.0 |
| uncharacterized protein | ALO56_04029 | Not Available | Positive | 3878829 - 3879848 | 35552.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









