Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| regulatory protein lysr | ALO56_04010 | Not Available | Negative | 3855532 - 3856371 | 30186.4 |
| glutamine amidotransferase | ALO56_04011 | Not Available | Positive | 3856542 - 3857303 | 27240.5 |
| dna-binding protein | ALO56_04012 | P0A9U6 | Positive | 3857407 - 3857955 | 20060.8 |
| putative tonb-dependent receptor | ALO56_04013 | Not Available | Negative | 3857976 - 3860126 | 78315.6 |
| putative metallothionein | ALO56_04014 | Not Available | Positive | 3860370 - 3860594 | 8014.04 |
| uncharacterized protein | ALO56_04015 | Q9ZVY7 | Positive | 3860634 - 3861476 | 30754.4 |
| double-stranded beta helix domain-containing protein | ALO56_04016 | Not Available | Positive | 3861522 - 3862088 | 20694.9 |
| nad-dependent formaldehyde dehydrogenase | ALO56_04017 | P47734 | Negative | 3862116 - 3863285 | 41924.2 |
| cye/dehydrase | ALO56_04018 | Not Available | Negative | 3863285 - 3864139 | 30906.9 |
| uncharacterized protein | ALO56_04019 | P21363 | Negative | 3864235 - 3864750 | 19256.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









