Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fumarate hydratase s ii | ALO56_05036 | Q51404 | Negative | 3841104 - 3842648 | 55019.6 |
| faga protein | ALO56_03389 | Not Available | Negative | 3842473 - 3842868 | 15176.3 |
| para-aminobenzoate synthase subunit i | ALO56_01798 | P12680 | Negative | 3843340 - 3844686 | 48939.3 |
| uncharacterized protein | ALO56_01799 | Not Available | Negative | 3844783 - 3845763 | 35965.4 |
| membrane protein | ALO56_01800 | Not Available | Negative | 3845760 - 3847298 | 57029.3 |
| gntr family transcriptional regulator | ALO56_01801 | Not Available | Positive | 3848115 - 3848843 | 27606.0 |
| methylisocitrate lyase | ALO56_100043 | Q937P0 | Positive | 3848837 - 3849733 | 32240.7 |
| citrate synthase | ALO56_100885 | Q8EJW2 | Positive | 3849806 - 3851002 | 44775.7 |
| aconitate hydratase | ALO56_01802 | Q937N8 | Positive | 3851085 - 3853673 | 94066.5 |
| acnd-accessory protein prpf | ALO56_01803 | Q8EJW4 | Positive | 3853894 - 3855078 | 41226.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









