Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| osta family protein | ALO56_03378 | P0ADV3 | Positive | 3833950 - 3834498 | 19746.6 |
| abc transporter atp-binding protein | ALO56_03379 | P0A9V3 | Positive | 3834498 - 3835223 | 26513.2 |
| rna polymerase sigma-54 factor | ALO56_03380 | P0A171 | Positive | 3835443 - 3836912 | 55817.9 |
| ribosomal subunit interface protein | ALO56_03381 | P0A147 | Positive | 3836987 - 3837295 | 11623.2 |
| pts transporter subunit iia-like nitrogen-regulatory protein ptsn | ALO56_03382 | Q9HVV4 | Positive | 3837308 - 3837772 | 16721.2 |
| nucleotide-binding protein | ALO56_03383 | Q48EB2 | Positive | 3837775 - 3838632 | 32064.6 |
| phosphotransferase system, phosphocarrier protein hpr | ALO56_03384 | Q9HVV2 | Positive | 3838649 - 3838921 | 9571.68 |
| zinc/iron permease | ALO56_03385 | Q06916 | Negative | 3839082 - 3839969 | 29775.7 |
| superoxide dismutase | ALO56_03386 | P77929 | Negative | 3839997 - 3840608 | 22739.7 |
| uncharacterized protein | ALO56_03387 | Not Available | Negative | 3840610 - 3841071 | 17507.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









