Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | ALO56_05035 | Q48EC7 | Negative | 3826861 - 3828171 | 46416.9 |
| toluene tolerance protein ttg2f | ALO56_03369 | Not Available | Negative | 3828149 - 3828388 | 8905.68 |
| stas domain-containing protein | ALO56_03370 | Not Available | Negative | 3828502 - 3828807 | 10737.1 |
| toluene tolerance protein | ALO56_03371 | Q9Z3Z9 | Negative | 3828804 - 3829457 | 23956.6 |
| toluene tolerance protein ttg2c | ALO56_03372 | P64605 | Negative | 3829468 - 3829935 | 16390.9 |
| toluene tolerance proteinttg2b | ALO56_03373 | P45030 | Negative | 3829935 - 3830732 | 28325.2 |
| toluene tolerance abc transporter atp-binding protein | ALO56_03374 | P63388 | Negative | 3830732 - 3831541 | 29533.9 |
| arabinose 5-phosphate isomerase | ALO56_03375 | Q9HVW0 | Positive | 3831867 - 3832841 | 34486.0 |
| phosphatase, yrbi family protein | ALO56_03376 | Q8ZB47 | Positive | 3832842 - 3833381 | 19372.3 |
| uncharacterized protein | ALO56_03377 | Not Available | Positive | 3833391 - 3833963 | 21506.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









