Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoheptose isomerase | ALO56_03349 | Q4ZNX7 | Positive | 3806304 - 3806900 | 21434.7 |
| transport-associated protein | ALO56_100034 | P45301 | Positive | 3806897 - 3807475 | 20517.8 |
| stringent starvation protein a | ALO56_03350 | P0ACA5 | Negative | 3807959 - 3808576 | 23358.3 |
| ubiquinol-cytochrome c reductase cytochrome c1 subunit | ALO56_03351 | O31216 | Negative | 3808801 - 3809580 | 29006.1 |
| cytochrome b | ALO56_03352 | O31215 | Negative | 3809577 - 3810791 | 46030.1 |
| ubiquinol-cytochrome c reductase iron-sulfur subunit | ALO56_03353 | O31214 | Negative | 3810791 - 3811384 | 20833.0 |
| 30s ribosomal protein s9 | ALO56_03354 | C3K6E2 | Negative | 3811639 - 3812031 | 14603.7 |
| 50s ribosomal protein l13 | ALO56_03355 | Q48EE0 | Negative | 3812046 - 3812474 | 15923.3 |
| arac family transcriptional regulator | ALO56_05031 | Not Available | Positive | 3812869 - 3813864 | 37836.0 |
| atpase | ALO56_05032 | P64613 | Negative | 3813940 - 3815046 | 42618.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









