Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO56_03183 | Not Available | Positive | 317647 - 317973 | 11695.8 |
| lysr family transcriptional regulator | ALO56_03184 | P34818 | Negative | 317974 - 318930 | 34863.6 |
| tryptophan synthase beta chain | ALO56_03185 | Q500R4 | Positive | 319010 - 320239 | 44557.5 |
| tryptophan synthase alpha chain | ALO56_03186 | Q88B60 | Positive | 320236 - 321048 | 28422.0 |
| cigr | ALO56_03187 | Not Available | Positive | 321177 - 321650 | 17083.3 |
| 3-oxoadipate enol-lactonase | ALO56_03188 | Q59695 | Negative | 321922 - 322746 | 30116.4 |
| lysr family transcriptional regulator | ALO56_03189 | Not Available | Negative | 323035 - 323985 | 35323.3 |
| choline-sulfatase | ALO56_100215 | O69787 | Positive | 324082 - 325605 | 57762.9 |
| substrate-binding region of abc-type glycine betaine transport system | ALO56_03190 | Not Available | Positive | 325644 - 326570 | 33406.2 |
| uncharacterized protein | ALO56_03191 | Not Available | Positive | 326677 - 327045 | 13095.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









