Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylmuramoylalanine--d-glutamate ligase | ALO56_03339 | Q4ZNY8 | Negative | 3793426 - 3794772 | 48057.7 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | ALO56_03340 | Q87WY2 | Negative | 3794778 - 3795860 | 39482.6 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | ALO56_03341 | P11880 | Negative | 3795860 - 3797230 | 47389.5 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | ALO56_03342 | Q87WY0 | Negative | 3797223 - 3798686 | 51894.0 |
| peptidoglycan glycosyltransferase | ALO56_05030 | G3XD46 | Negative | 3798686 - 3800506 | 66098.8 |
| cell division protein ftsl | ALO56_03344 | Q9HVZ6 | Negative | 3800413 - 3800706 | 10912.5 |
| ribosomal rna small subunit methyltransferase h | ALO56_03345 | Q48EF0 | Negative | 3800703 - 3801644 | 34315.1 |
| protein mraz | ALO56_03346 | Q4ZNY1 | Negative | 3801647 - 3802117 | 17677.3 |
| ribosomal rna small subunit methyltransferase i | ALO56_03347 | Q9HVZ3 | Negative | 3802855 - 3803724 | 31418.0 |
| lipoprotein | ALO56_03348 | A8GJZ0 | Positive | 3803999 - 3805813 | 65327.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









