Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO56_03329 | Not Available | Positive | 3781995 - 3782450 | 17070.7 |
| sensor histidine kinase/response regulator | ALO56_05027 | P0C0F7 | Negative | 3782468 - 3784126 | 60895.3 |
| udp-3-o- n-acetylglucosamine deacetylase | ALO56_03331 | Q87WZ1 | Negative | 3784320 - 3785231 | 33142.6 |
| cell division protein ftsz | ALO56_03332 | Q59692 | Negative | 3785344 - 3786531 | 41527.1 |
| cell division protein ftsa | ALO56_05029 | P47203 | Negative | 3786608 - 3787882 | 45247.7 |
| cell division protein ftsq | ALO56_03334 | G3XDA7 | Negative | 3787879 - 3788742 | 32673.8 |
| d-alanine--d-alanine ligase | ALO56_03335 | Q87WY7 | Negative | 3788746 - 3789705 | 34068.8 |
| udp-n-acetylmuramate--l-alanine ligase | ALO56_03336 | Q4ZNZ1 | Negative | 3789702 - 3791162 | 52845.8 |
| udp-n-acetylglucosamine--n-acetylmuramyl- pyrophosphoryl-undecaprenol n-acetylglucosamine transferase | ALO56_03337 | Q48EF8 | Negative | 3791155 - 3792225 | 38023.5 |
| lipid ii flippase ftsw | ALO56_03338 | C3KCS9 | Negative | 3792215 - 3793429 | 44067.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









