Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO56_03321 | Not Available | Positive | 3770220 - 3770531 | 11063.1 |
| mechanosensitive ion channel family protein | ALO56_03322 | Q89AB5 | Negative | 3770607 - 3771437 | 29655.6 |
| hypothetical protein | ALO56_100115 | Q4ZP05 | Negative | 3771557 - 3772069 | 19319.5 |
| 2-dehydropantoate 2-reductase | ALO56_03323 | Q9HW09 | Positive | 3772208 - 3773128 | 33186.8 |
| sensory box histidine kinase | ALO56_05023 | Q02482 | Positive | 3773026 - 3775209 | 80591.7 |
| uncharacterized protein | ALO56_03325 | Q1LJ80 | Positive | 3775224 - 3775802 | 20766.0 |
| uncharacterized protein | ALO56_03326 | O67378 | Negative | 3775994 - 3776941 | 34152.8 |
| glutathione s-transferase family protein | ALO56_03327 | Not Available | Negative | 3776944 - 3777576 | 23973.8 |
| bifunctional ornithine acetyltransferase / n-acetylglutamate synthase | ALO56_100021 | Q4ZNZ9 | Negative | 3777622 - 3778893 | 44562.3 |
| protein translocase subunit seca | ALO56_03328 | Q48EG6 | Negative | 3778951 - 3781707 | 104060.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









