Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| binding ferredoxin | ALO56_01596 | P77165 | Negative | 3758822 - 3759382 | 19910.8 |
| xanthine/uracil/vitamin c permease | ALO56_01597 | P31466 | Positive | 3759634 - 3760929 | 44953.6 |
| heat shock protein 60 family chaperone groel | ALO56_100016 | Q48EI5 | Negative | 3762563 - 3764212 | 57355.5 |
| 10 kda chaperonin | ALO56_03316 | Q48EI4 | Negative | 3764256 - 3764549 | 10282.4 |
| fxsa protein | ALO56_100864 | O32064 | Negative | 3764807 - 3765304 | 18496.2 |
| uncharacterized protein | ALO56_03317 | Not Available | Negative | 3765369 - 3766100 | 27086.2 |
| 3-ketoacyl- reductase | ALO56_03318 | Not Available | Positive | 3766196 - 3766996 | 28334.3 |
| peptide chain release factor rf-3 | ALO56_100343 | Not Available | Negative | 3767048 - 3768055 | 37463.8 |
| methylated-dna--cysteine s-methyltransferase | ALO56_03319 | P0AFP2 | Positive | 3768216 - 3768572 | 12723.2 |
| ampg-related permease | ALO56_03320 | Q92I85 | Positive | 3768627 - 3770177 | 56395.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









