Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family acetyltransferase | ALO56_02358 | P58572 | Negative | 3705553 - 3707301 | 64860.1 |
| asparagine synthetase | ALO56_02359 | P54420 | Negative | 3707306 - 3709078 | 65601.5 |
| uncharacterized protein | ALO56_02360 | Not Available | Negative | 3709246 - 3710322 | 39761.3 |
| abc transporter permease | ALO56_04861 | Not Available | Negative | 3710312 - 3712849 | 92702.2 |
| abc transporter atp-binding protein | ALO56_02362 | Q5WUF8 | Negative | 3712782 - 3713450 | 24332.3 |
| trna 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein mnmc | ALO56_02363 | Q48LF6 | Negative | 3713753 - 3715744 | 72866.7 |
| uncharacterized protein | ALO56_02364 | Q886D9 | Positive | 3715896 - 3717392 | 58091.1 |
| type i secretion membrane fusion protein, hlyd family | ALO56_02365 | Q7ANN5 | Negative | 3717537 - 3718865 | 48502.1 |
| multidrug/toxin efflux protein, atp-binding and membrane protein | ALO56_02366 | Q9ZNB0 | Negative | 3718878 - 3721043 | 78900.0 |
| type i secretion outer membrane protein, tolc | ALO56_02367 | Q8G0Y6 | Negative | 3721065 - 3722420 | 50405.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









